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If muscle completes successfully, it will create a file seqs.afa containing the alignment. By default, output is created in "aligned FASTA" format (hence the .afa extension). This is just like regular FASTA except that gaps are added in order to align the sequences. This is a nice format for computers but not very readable for
MUSCLE is a program for creating multiple alignments of amino acid or nucleotide sequences. A range of options is provided that give you the choice of optimizing accuracy, speed, or some compromise between the two. Default parameters are those that gave the best average benchmark accuracy in my tests. However
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5 May 2014
At the dyno and on the drag strip, the GSX1100F is the fastest, most powerful motorcycle Suzuki ever produced by 1988, period. . pleasantly reminisce, because it doesn't leave you much to pick on: the exhaust note could be quieter; the engine could be smoother; and operating the centerstand requires too much muscle.

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February 2018