README for high-level documentation of the entire EIGENSOFT package. This file contains documentation of EIGENSTRAT programs: smartpca.perl: run
9 Apr 2014 We compared flashpca with smartpca from EIGENSOFT v4.2 agreement as well (see File S1 and the online documentation for results for PCs 1–10). of flashpca is its memory requirements for large datasets: using 15,000
Contribute to eigensoft development by creating an account on GitHub. README for high-level documentation of the entire EIGENSOFT package.
22 Jul 2011 This document presents draft guidelines for molecular genetic components analysis (EIGENSTRAT) to explicitly model ancestry differences
Please read the PLINK documentation for *.tfam file specification if you are not familiar with it. . and that for PC analysis GenABEL uses the EIGENSTRAT algorithm. . no general guideline on ? since it describes how much a specific test is
18 Jul 2016 Review Board with a waiver of documentation of consent. of IDs, we used eigenstrat to run principal component analysis on each .. By submitting a comment you agree to abide by our Terms and Community Guidelines.
22 Jul 2014 Software EIGENSOFT [2] is designed to perform PCA for example to . be found in the supplementary file and fcGENE's documentation, which

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February 2018