Tuesday 20 March 2018 photo 1/56
|
finnigan xcalibur
=========> Download Link http://lyhers.ru/49?keyword=finnigan-xcalibur&charset=utf-8
= = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = = =
Xcalibur®, SpectraSYSTEM®, and Surveyor® are registered trademarks of Thermo Electron Corporation. LTQ,™ and Finnigan™ are trademarks of. Thermo Electron Corporation. Teflon®, Delrin®, and Tefzel® are registered trademarks of E.I. du Pont de Nemours & Co. Kel-F® is a registered trademark of 3M Company, Inc. Xcalibur software (designed for compliance with 21 CFR Part 11) implements some of these controls directly and relies on the security functions in the Microsoft. ®. Windows. ®. XP Professional operating system for other parts. For example: • The Finnigan Security Server controls secure file operations. • The administrator. This Thermo-Finnagan LCQ Mass Spectrometer is in excellent condition and comes with a computer that has Xcalibur. This unit also comes with a set of manuals. Options: CTC Pal autosampler is also available to add for $2500 if purchased together. ThermoFinnigan Thermo Finnigan Xcalibur 1.3 PolarisQ 1.3.1 P/N 120026 | Business & Industrial, Healthcare, Lab & Life Science, Lab Equipment | eBay! United States, Canada, United Kingdom, Denmark, Romania, Slovakia, Bulgaria, Czech Republic, Finland, Hungary, Latvia, Lithuania, Malta, Estonia, Australia, Greece, Portugal, Cyprus, Slovenia, Japan, Sweden, Korea, South, Indonesia, Taiwan, South Africa, Thailand, Belgium, France, Hong Kong, Ireland, Netherlands,. Use of NIST Library with Finnigan Xcalibur Software. Table of Contents. 1.0. Introduction. 2.0. Installing Software. 2.1. Initial Install of Software. 2.2. Installing NIST, Wiley6 or 7, User, and Xcalibur Demo Libraries. 2.3. Updating to NIST Version 1.7 or 2.0. 3.0. Using the Search Software. 3.1. Using Internal NIST-Xcalibur. Get expert answers to your questions in Analytical Chemistry and Computational Chemistry and more on ResearchGate, the professional network for scientists. Finnigan Xcalibur. Interactive Searching. The utilities provided by Thermo Electron for converting Xcalibur binary (RAW) files into peak list (DTA) files, lcq_dta.exe and extract_msn.exe, are Windows console (DOS) applications. Usage information can be displayed by executing either utility without any. discovery, bioanalysis, environmental analysis, etc. The JASCO Instrument Control Driver simplifies seamless coupling of JASCO HPLC system with Thermo Finnigan mass spectrometers and enables full system control in Thermo Finnigan Xcalibur data system environment. The system configuration and HPLC parameters. Thermo Finnigan's XCalibur instrument control software is the choice of many labs in this field. XCalibur manages the pumps required for producing MudPIT gradients, automates the processes of peptide selection and CID, and. Figure 5.5. Chemistry of collision induced dissociation. SPECTRAL ANALYSIS 99. ... formic acid) versus solvent A (2% CH3CN/0.1% formic acid), then to 90% B for an additional 5 min. Data was acquired in data‐dependent mode using the Thermo Finnigan Xcalibur soft‐ware (version 2.0.6). The precursor ion scan MS spectra (m/z 440–2000) were acquired in the Orbitrap with a resolution R="60000" at m/z. CH), MassSpec/Finnigan (*.mss), GCQ or ITS40 (*.ms, includes older Varian Saturn data files), Varian SMS (*.sms), JEOL Shrader (*.lrp), PE TurboMass (*RAW/_functns.inf) , Thermo Finnigan XCalibur (*.RAW) converter>, Shimadzu (*.gqd) , and the JCAMP-DX import (*.jdx). Many mass. Instrument: Thermo-Finnigan LCQ-Duo system equipped with an ESI ion source, a SpectraSystem P4000 gradient pump, a Spectra-System A3000 autosampler and a Thermo-Finnigan Xcalibur data system; the autosampler injector valve was directly connected to the inlet valve 261 Chemical warfare agents Table 12.1. JASCO has developed an instrument control package to be used with the Finnigan XCalibur software for Mass Spectrometry applications. Instrument control. Control is available of. all the major pump configurations; Autosamplers; UV-visible detectors; Column ovens. The driver is backwards compatible to LC-900 series. For background, I'm trying to write a simple python script that extracts particular metadata from a .RAW file, produced by a Thermo Finnigan mass spectrometer. Tools that exist for parsing these files require access to proprietary XCalibur libraries, which I do not have. Thermo provided a link to MSFileReader. The key driver for this automated integrated approach has been the access to processing and instrument control via the COM objects of the Finnigan Xcalibur software package. This access to the programming objects of the vendor software has allowed us to focus our programming efforts on those aspects that allow us to. The RelEx quantitation software seems to be suitable for any type of labeling but is restricted to the analysis of Finnigan Xcalibur datafiles (MacCoss et al., 2003). On the other hand the TPP pipeline supports most types of MS/MS data as well as several search engines, such as X!Tandem, Phenyx, MASCOT and SEQUEST. This Thermo-Finnagan LCQ Mass Spectrometer is in excellent condition and comes with a computer that has Xcalibur. This unit also comes with a set of. Finnigan Xcalibur. Interactive Searching. The utilities provided by Thermo Electron for converting Xcalibur binary (RAW) files into peak list (DTA) files, lcq_dta.exe and extract_msn.exe, are Windows console (DOS) applications. Usage information can be displayed by executing either utility without any arguments. Additional. NET). It has an export facility to transfer information to databases that is supported by the .NET framework. For access to information in spectrum files it depends on vendor supplied COM components/libraries from (currently) three commercial packages, Sciex's Analyst, Finnigan's XCalibur and Micromass' MassLynx. Finnigan Xcalibur Getting Productive: Processing Setup and the Analysis of Quantitation Data Strongly Agree The manual is well organized. The manual is clearly written. The manual contains all of the information I need. The instructions are easy to follow. The instructions are complete. The technical information is easy to. Finnigan TRACE MS Hardware Manual____________________. The icons shown on the road map provide access to all the Xcalibur modules, including: • Instrument Setup. Use this module to configure the TRACE MS system and attached instruments (such as the GC and autosamplers), prior to the acquisition of data. ZoomScan™, LCQ™, and Finnigan™ are trademarks of and Xcalibur® is a registered trademark of Thermo Electron Corporation. Microsoft® and. Windows® are registered trademarks of Microsoft Corporation. PEEK™ is a trademark of Victrex, plc. Kel-F® is a registered trademark of 3M. Company, Inc. Teflon® and Tefzel®. Thermo Finnigan Xcalibur User Guide Set Xcalibur user guide set Brand new, Sealed in packaging Set of 8 guides. Xcalibur™ and PolarisQ™ are trademarks and/or product names of Thermo Finnigan. Microsoft® is a registered trademark of Microsoft Corporation. Technical information contained in this publication is for reference purposes only and is subject to change without notice. Every effort has been made to supply complete and. United States, Canada, United Kingdom, Denmark, Romania, Slovakia, Bulgaria, Czech Republic, Finland, Hungary, Latvia, Lithuania, Malta, Estonia, Australia, Greece, Portugal, Cyprus, Slovenia, Japan, Sweden, Korea, South, Indonesia, Taiwan, Belgium, France, Hong Kong, Ireland, Netherlands, Poland, Spain, Italy,. 5. Selecting a Default Peak Detection Algorithm. 6. Selecting Default Mass Options. 7. Selecting Default Labeling and Scaling Options. 8. Selecting Error Handling Options. 9. Defining the Dataset List. Contents. • Configuring Xcalibur Software. • Converting File Formats. • Confirming the Properties of Finnigan Secruity Server. Now anyone can read native Finnigan Xcalibur files. Thank you Insilicos and ISB! Here are a few screen shots of the program. Figure 3. Figure 3: This is a screen shot of the viewer with a base peak plot in the upper left hand frame and a full MS spectrum in the bottom plot. Notice the tabs at the bottom, the. The Finnigan LCQTMDUO is a powerful and compact benchtop mass spectrometer for LC/MS/MS. The Finnigan LCQ-DUO equipped with Xcalibur software permits in-line acquisition and integration of HPLC dual-wavelength absorbance data along with mass spectral data. WideBand ActivationTM a standard feature on the. Looks like my instrument does not appear in the list for the Xcalibur configuration. There closest is for a Finnigan Q-GC which I am fairly sure is a gas chormatograper not an MS. Given that Fischer Thermo no longer supports my MS, where could I find a software version of Xcalibur or other software to run my. It seems that not all version of Xcalibur works, but only the oldest, it should be 1.2 version but I'm not sure. I've the version 1.3 for lcq advantage and it give back an error of wrong software version. Indeed in the xcalibur configuration there is not the possibility to choose the finnigan mat lcq MS. So I'd really. All operations were controlled by Finnigan Xcalibur software on a Windows NT 4.0 system. Analysis was by multiple reaction monitoring, and the ion transition channels used for monitoring decitabine, THU and the internal standard were. 229.00>113.13 (E=12%), 247.10>115.10(E=16%) and 247.10>115.10 (E=16%),. into the Thermo Finnigan TRACE MS via the direct exposure probe (DEP) technique, also known as desorption chemical ionization (DEP). The AutoProbe is fully integrated with the. Thermo Finnigan Xcalibur software environment: AutoProbe system setup, methods setup, system operation, and data storage are seamlessly. The AutoProbe™ operates in the Thermo Finnigan Xcalibur™ MS Software environment and is fully integrated with the Xcalibur™ software, including system setup, methods setup, system operation and data storage. Applications of the direct probe technique include the screening of drug and pharmaceutical samples,. Included with the Finnigan Mat LCQ Mass Spectrometer are: Edwards E2M30 vacuum pump. Cabinet/Stand. Finnigan Xcalibur instrument software for Finnigan LCQ series revision 1.2 SP1. Finnigan Xcalibur instrument software for Finigan LCQ Series Revision SRI. Xcalibur manuals revision A. Misc. attachments; i.e.. System Requirements. You should follow the general system requirements for installing the version of Xcalibur that you plan to use. The system requirements for running ProMass are listed below: Finnigan Xcalibur v. 1.2 or later must be installed. PC with a Pentium II processor or later (> 400 MHz recommended). At least. Dear David, thanks for the reply, which somewhat clarified the situation a little bit. I know now, that I am just looking for the binary structure and. GC/MS data file format of Themo Finnigan XCalibur RAW files. Anyway, I need to bulk process and read XCalibur RAW files and would appreciate any clues on how to natively,. The Thermo Finnigan LCQ Deca LC / MS has a proven reputation of the full sensitivity analysis and reliability analysis of complex mixtures and matrices. Ion Max source universal plug and play allows easy switching of ionization probes. Capacity fully automated MS data and advanced scanning functions dependent (DDS). The Xcalibur™ data system controls each detector and simultaneously acquires data from the two analog detectors and the DSQ mass spectrometer. Lock in Retention Time at the Touch of a Button. The Finnigan TRACE GC virtually eliminates retention time shifts caused by column-to- column variations. With the proprietary. High Mass mode (if Finnigan's Xcalibur software is installed). The. AP/MALDI source, like the conventional MALDI source, produces mostly singly-charged ions. As a result, the present capability of the. Finnigan ion trap limits the mass range of the AP/MALDI-LCQ combination to 4,000Da. • AP/MALDI is a softer ionization. CH); JCAMP-DX import (*.jdx); MassSpec/Finnigan (*.mss); GCQ or ITS40 (*.ms); Varian SMS (*.sms); JEOL Shrader (*.lrp); NIST import (*.msp); Text single spectrum import (*.txt); PE TurboMass (*RAW/_functns.inf) ; Thermo Finnigan XCalibur (*.RAW) ; Shimadzu (*.gqd) . Xcalibur. ™. ,GCQ Plus. ™. , and Polaris are trademarks and/or product names of Finnigan Corporation. Microsoft. ® is a registered trademark of. Microsoft Corporation. Technical information contained in this publication is for reference purposes only and is subject to change without notice. Every effort has been made to. community and there exist many web resources. The clustered MGF files are important because they will be imported into the NIST MS Search program. MGF files usually contain multiple MS/MS scans. The current procedure describes the installation for Thermo Finnigan XCalibur *.RAW format. For other vendors please. Finnigan LTQ Mass Spectrometer–Basic Operation. Part 2. LCMS. Select Xcalibur application, then select Instrument setup . Select a previously defined method with File/Open,. Consult p 1-12 of Finnigan LTQ Getting Started manual, which is also posted on the bulletin board. For Surveyor AS the defaults should work in. Xcalibur: Getting Productive with Qualitative Analysis xiii. Contact Customer Service. In the US and Canada for ordering information: Phone: 1-800-532-4752. Fax: 1-561-688-8731. International contacts for ordering information: · Visit www.thermo.com/finnigan for the current listing. Changes to the Manual and Online Help. Electrospray ionization mass spectrometry was carried out using a ThermoQuest Finnigan LCQ-Duo in the positive ion mode. Data were processed using ThermoQuest Finnigan's Xcaliburä Biomass Calculation and Deconvolution software. High Resolution Mass Spectrometry (HRMS) was carried out with Orbi-trap (Thermo. owners and are hereby acknowledged. 6. Most instrument vendors now incorporate a Mascot interface into their data analysis packages. In addition, you can always use Mascot Daemon to automate data processing and search submission, as illustrated elsewhere in this brochure for. Finnigan Xcalibur data from. Data processing: Area integration and comparison was carried out using LCQuan in the Finnigan Xcalibur. V1.3 software bundle using the following parameters: Peak Identification Algorithm: ICIS, highest peak in specified time window. ICIS Peak Integration Parameters: Smoothing points: 1. Baseline window: 40. It combines optimized hardware with the powerful Thermo Finnigan Xcalibur data system to dramatically cut analysis times for identifying unknowns -- even in difficult matrices. PolarisQ features next-generation external ionization technology for outstanding sensitivity and linearity as well as reduced source maintenance. BioWorks, LCQ, LCquan, and Web Access are trademarks, and Accela, Finnigan, LTQ, Surveyor,. TSQ Quantum, and Xcalibur are registered trademarks of Thermo Fisher Scientific Inc. in the United States. The following are registered trademarks in the United States and other countries: Access, Excel, Microsoft, Vista, and. Algorithms for protein identification experiments performed in the MALDI-IT mass spectrometer. (A) Algorithm for automatic collection of MS/MS spectra of the N most abundant peaks found in a particular m/z segment (supported by the existing Xcalibur software that controls the Thermo-Finnigan ion trap mass spectrometer.). From: Antonio Artigues Subject: Xcalibur data file conversion Date: Fri, 27 Oct 2000 16:39:09 -0500 Organization: * Dear Colleagues, We are using an ESI LCQ (Finnigan) to do mass analysis of proteins and peptides. The averaged spectra of proteins (Abundance vs m/z) can easily be captured as an. Surveyor Plus Getting Started with Xcalibur. Thermo Electron Corporation. Contacting Us There are several ways to contact Thermo Electron Corporation. Assistance For new product updates, technical support, and ordering information, contact us in one of the following ways: Visit Us on the Web www.thermo.com/finnigan. Results 1 - 100 of 240. Pub. Date: July-01-2009; DOI:10.1007/978-1-60327-310-7_20. Summary: in-house) 6. Temperature controlled autosampler (Agilent, Palo Alto, CA) 7. Ion trap mass spectrometer, Finnigan LTQ linear ion trap (ThermoElectron Corp., Waltham, MA) 8. Xcalibur interface software... Abstract | Full Text | PDF. Spectrometer (Finnigan MAT, San Jose, CA) equipped with an ESI source. The MS instrument was operated in a positive-ion mode with Finnigan Xcalibur software 1.1. The spectra were obtained in full scan mode (150-350 m/z). The collision energy for collision induced dissociation was set to 35 eV. As a control, a PQS. The Finnigan LCQ Advantage is an ion trap mass spectrometer. The instrument is capable of performing.. Xcalibur and LCQ tune windows. Open. Xcalibur first. Note that the mass spec, the LC, and the auto sampler are ready. The Xcalibur window, also called Roadmap-homepage, should look like the. Refurbished Thermo Finnigan LCQ Classic LC/MS/MS ion trap complete with the following: API Stack, ESI Probe, Edwards model E2M30 vacuum pump with hose, Pentium IV PC, monitor, keyboard, mouse, and new Finnigan Xcalibur 2.0 software with license. OPTIONAL: APCI Probe, MassTech AP Maldi ion source with. A bottom-up approach to achieve full oligosaccharide and glycan characterization has been described that is based on an MSn fragment spectral library and associated tools. The library, identified as FragLib, was initiated with known standards and commercially available oligomers prepared as methylated derivatives. There is a bewildering choice of software to convert Xcalibur data into peak lists and submit these to a Mascot Server for searching. This page lists some of the more widely used options. Remember that the spectra in Xcalibur raw files may contain centroid data, rather than profile data. With the latest hybrid instruments,.
Annons