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weka.clusterers package
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JavaScript is disabled on your browser. Skip navigation links. Package; Class; Tree · Deprecated · Index · Help. Prev Package; Next Package. Frames · No Frames · All Classes. All Packages Class Hierarchy Index WEKA's home. package weka.clusterers. Class Index. ClusterEvaluation · Clusterer · Cobweb · DistributionClusterer · EM. Interface Summary. Clusterer, Interface for clusterers. DensityBasedClusterer, Interface for clusterers that can estimate the density for a given instance. NumberOfClustersRequestable, Interface to a clusterer that can generate a requested number of clusters. UpdateableClusterer, Interface to incremental cluster models that. Class Summary. Clusterer, Abstract clusterer. ClusterEvaluation, Class for evaluating clustering models. Cobweb, Class implementing the Cobweb and Classit clustering algorithms. DensityBasedClusterer, Abstract clustering model that produces (for each test instance) an estimate of the membership in each cluster (ie. Package weka.clusterers. Interface Summary. Clusterer, Interface for clusterers. DensityBasedClusterer, Interface for clusterers that can estimate the density for a given instance. NumberOfClustersRequestable, Interface to a clusterer that can generate a requested number of clusters. UpdateableClusterer, Interface to. Several other packages listed earlier in Figure 14.1(a) are worth mentioning: weka.associations, weka.clusterers, weka.datagenerators, weka.estimators, weka. filters, and weka.attributeSelection. The weka.associations package contains association-rule learners. These learners have been placed in a separate package. Clustering. Building a Clusterer. Batch. Incremental. Evaluating. Clustering instances. Classes to clusters evaluation. Attribute selection. Meta-Classifier. Filter. Low-level. Note on. Use the NominalToString or StringToNominal filter (package weka.filters.unsupervised.attribute) to convert the attributes into the correct type. clusterer, a reference (of class jobjRef) to a Java object obtained by applying the Weka buildClusterer method to the training instances using the given control options. class_ids, a vector of integers indicating the class to which each training instance is allocated (the results of calling theWeka clusterInstance method for the. cl1 Weka_control(N = 3)) cl1 table(predict(cl1), iris$Species) ## Not run: ## Requires Weka package 'XMeans' to be installed. ## Use XMeans with a KDTree. cl2 ", "-K", "weka.core.neighboursearch.KDTree -P")) cl2 table(predict(cl2), iris$Species). moa.streams.generators · moa.streams.generators.multilabel · moa.tasks · weka · weka.classifiers · weka.classifiers.meta · weka.core · weka.datagenerators · weka.datagenerators.classifiers · weka.datagenerators.classifiers.classification · weka.gui · File List · Directories. Packages | Classes. Package moa.clusterers.clustree. An R interface to Weka (Version 3.9.2). Weka is a collection of machine learning algorithms for data mining tasks written in Java, containing tools for data pre-processing, classification, regression, clustering, association rules, and visualization. Package 'RWeka' contains the interface code, the Weka jar is in a separate. Weka >= 3.7.2 has a package management system. A bunch of algorithms and all third-party contributions are now available via downloadable "packages". Open up the GUIChooser and under the "Tools" menu you will find Weka's built in package manager GUI. Install the optics_dbScan package. Package. Submodules · weka.flow.base module · weka.flow.container module · weka.flow.control module · weka.flow.conversion module · weka.flow.sink module · weka.flow.source module · weka.flow.transformer module · Module contents · weka.plot package · Submodules · weka.plot.classifiers module · weka.plot.clusterers module. weka mirror with git — http://www.cs.waikato.ac.nz/ml/weka/" class="" onClick="javascript: window.open('/externalLinkRedirect.php?url=http%3A%2F%2Fwww.cs.waikato.ac.nz%2Fml%2Fweka%2F');return false">http://www.cs.waikato.ac.nz/ml/weka/ GitHub is where people build software. More than 27 million people use GitHub to discover, fork, and contribute to over 80 million projects. Hierarchy For Package weka.clusterers. Class Hierarchy. java.lang.Object. weka.clusterers.AbstractClusterer (implements weka.core.CapabilitiesHandler, java.lang.Cloneable, weka.clusterers.Clusterer, weka.core.RevisionHandler, java.io.Serializable). weka.clusterers.SelfOrganizingMap (implements weka.core. Skip navigation links. Overview; Package; Class; Use · Tree · Deprecated · Index · Help · Prev Package; Next Package. Frames · No Frames · All Classes. Copyright © 2017. All rights reserved. Clustering. algorithms. The process of building a cluster model is quite similar to the process of building a classification model, that is, load the data and build a model. Clustering algorithms are implemented in the weka.clusterers package,. Clustering algorithms are implemented in the weka.clusterers package, as follows: import java.io.BufferedReader; import java.io.FileReader; import weka.core.Instances; import weka.clusterers.EM; public class Clustering { public static void main(String args[]) throws Exception{ //load data Instances data = new. Package 'RWeka'. January 7, 2018. Version 0.4-37. Title R/Weka Interface. Description An R interface to Weka (Version 3.9.2). Weka is a collection of machine learning algorithms for data mining.. It is only possible to predict class memberships if the Weka clusterer provides a distributionForInstance. All Packages Class Hierarchy This Package Previous Next Index WEKA's home. Class weka.clusterers.Cobweb. java.lang.Object | +----weka.clusterers.Clusterer | +----weka.clusterers.Cobweb. public class Cobweb; extends Clusterer; implements OptionHandler. Constructor Index. o Cobweb(). Method Index. o add(Cobweb. All Packages Class Hierarchy This Package Previous Next Index WEKA's home. Class weka.clusterers.EM. java.lang.Object | +----weka.clusterers.Clusterer | +----weka.clusterers.DistributionClusterer | +----weka.clusterers.EM. public class EM; extends DistributionClusterer; implements OptionHandler. Simple EM (estimation. If you want to use the classpath environment variable and all currently installed Weka packages, use the following call: >>> jvm.start(system_cp=True, packages="True").. for inst in data: >>> cl = clusterer.cluster_instance(inst) # 0-based cluster index >>> dist = clusterer.distribution_for_instance(inst) # cluster membership. forOPTICSAndDBScan.DataObjects · weka.clusterers.forOPTICSAndDBScan.OPTICS_GUI · weka.clusterers.forOPTICSAndDBScan.Utils · weka.core · weka.core.converters · weka.core.logging · weka.core.mathematicalexpression · weka.core.matrix · weka.core.neighboursearch · weka.core.neighboursearch.balltrees. If you have the correct package installed that contains DBScan (I believe it is optics_dbScan), then you can use it from python-weka-wrapper. For installing a Weka package, you can use something like this: import weka.core.packages as packages #packages.refresh_cache() # uncomment this to query for. However, if I run the standalone Weka 3.8, the clusterer works in the GUI, but I don't find it in weka.jar. What do I miss? Best, Alexander. Re: Looking for XMeans, Peter Reutemann, 5/4/17 1:59 PM. XMeans is now a package. You have to start up the JVM with package support ("packages=True") to be able to. Cobweb.class weka.clusterers.DensityBasedClusterer.class weka.clusterers.EM.class weka.clusterers.FarthestFirst.class weka.clusterers.MakeDensityBasedClusterer.class weka.clusterers.NumberOfClustersRequestable.class weka.clusterers.SimpleKMeans.class weka.core.AdditionalMeasureProducer.class weka.core. Using WEKA in your java code (Clustering) Oussama Ahmia. Email: ahmia@labged.net. BUILDING A CLUSTERER. BATCH: A clusterer is built in much the same way as a classifier, but the. method buildClusterer(Instances) is replaced by buildClassifier(Instances). The following code snippet shows how to. All Packages Class Hierarchy This Package Previous Next Index WEKA's home. Class weka.clusterers.SimpleKMeans. java.lang.Object | +----weka.clusterers.Clusterer | +----weka.clusterers.SimpleKMeans. public class SimpleKMeans; extends Clusterer; implements OptionHandler. Simple k means clustering class. results in the following output of possible matches of package names: Possible matches: weka.classifiers weka.clusterers. • classname completion java weka.classifiers.meta.A lists the following classes. Possible matches: weka.classifiers.meta.AdaBoostM1 weka.classifiers.meta.AdditiveRegression. and Weka itself are contained in the RWeka package. For more information on. Give on-line information about available control options for Weka learners or filters and their R interfaces. Usage. WOW(x). tained from applying these interfaces to build an associator, classifier, clusterer, or filter. Details. public FilteredClusterer() { m_Clusterer = new SimpleKMeans(); m_Filter = new weka.filters.AllFilter(); } /** * Returns a string describing this clusterer. * * @return a description of the clusterer suitable for displaying in the * explorer/experimenter gui */ public String globalInfo() { return "Class for running an arbitrary clusterer on. Learn how to use popular packages that extend Weka's functionality and areas of application.. You'll connect up the popular R statistical package and learn how to use its extensive visualisation and preprocessing functions from Weka. You'll. Experiment with distributed implementations of Weka classifiers and clusterers. Example for Java types under weka.clusterers package. The public types defined in weka.clusterers package are listed in this page. To see the methods for each type click the links. HOME · Java · weka; weka.clusterers. Classes in weka.estimators used by weka.clusterers · DiscreteEstimator. Simple symbolic probability estimator based on symbol counts. Estimator Interface for probability estimators. data mining and knowledge discovery are the software packages Weka and R which have emerged from the. classes (including classifiers, clusterers, associators, filters, loaders, savers, and stemmers) with associated. provided by the R extension package RWeka (Hornik, Zeileis, Hothorn, and Buchta 2007). In the. Package 'RWeka'. January 23, 2018. Version 0.4-37. Title R/Weka Interface. Description An R interface to Weka (Version 3.9.2). Weka is a collection of machine learning algorithms for data mining.. It is only possible to predict class memberships if the Weka clusterer provides a distributionForInstance. The python-weka-wrapper package makes it easy to run Weka algorithms and filters from within Python... added weka.core.database module for loading data from a database; added make_copy class method to Clusterer class; added make_copy class method to Associator class; added make_copy class method to Filter. and Weka itself are contained in the RWeka package. For more information on. Give on-line information about available control options for Weka learners or filters and their R interfaces. Usage. WOW(x). tained from applying these interfaces to build an associator, classifier, clusterer, or filter. Details. 10. Sept. 2002.. 00012 00013 package de.picana.clusterer; 00014 00015 import de.picana.control.*; 00016 00017 import weka.core.*; 00018 import java.io.*; 00019 00020 00027 public class SimpleKMeans extends Clusterer { 00028 00029 private weka.clusterers.SimpleKMeans algo; 00030 private long time_total;. This page provides Java code examples for weka.clusterers.SimpleKMeans. The examples are extracted from open source Java projects. -I index (database) used for DBScan (default = weka.clusterers.forOPTICSAndDBScan.Databases.SequentialDatabase) -D distance-type (default = weka.clusterers.forOPTICSAndDBScan.DataObjects.EuclidianDataObject). Version: $Revision: 1.5 $; Author: Matthias Schubert (schubert@dbs.ifi.lmu.de),. weka.core package · weka.flow package; weka.plot package. Submodules; weka.plot.classifiers module; weka.plot.clusterers module; weka.plot.dataset module; weka.plot.experiments module; weka.plot.graph module; Module contents. Submodules · weka.associations module · weka.attribute_selection module. The weka.filters package is concerned with classes that transforms datasets -- by removing or adding attributes,... parameters are configurable depending on classification algorithm. All of WEKA's classifiers are available. 3.4.5. Clusterers. ○ supports all clustering algorithms presented in the textbook. Packages. weka · weka.associations · weka.attributeSelection · weka.classifiers · weka.classifiers.bayes · weka.classifiers.bayes.net · weka.classifiers.bayes.net.estimate · weka.classifiers.bayes.net.search · weka.classifiers.bayes.net.search.ci · weka.classifiers.bayes.net.search.fixed · weka.classifiers.bayes.net.search. Abstract clustering model that produces (for each test instance) * an estimate of the membership in each cluster * (ie. a probability distribution). * * @author Mark Hall (mhall@cs.waikato.ac.nz) * @version $Revision: 1.7 $ */ public abstract class DistributionClusterer extends Clusterer { // =============== // Public methods. Weka is the Data-mining software (open source) in Java (http://www.cs.waikato.ac.nz/~ml/weka/). It lacks some advanced cluster evaluations and algorithms such as Silhouette Coefficient, Cophenetic Distance Matrix and so on. We include these additional features into original Weka package, compile and. WEKA is a data mining system developed by the University of Waikato in New Zealand that implements data mining algorithms.. A trial version of Weka package can be downloaded from the University of... WEKA contains “clusterers" for finding groups of similar instances in a dataset. The clustering schemes available in. attributeSelection # Lists the Attribute Selection Search methods-Packages I want to choose from weka.attributeSelection.ASSearch = weka.attributeSelection # Lists the Associators-Packages I want to choose from weka.associations.Associator= weka.associations # Lists the Clusterers-Packages I want to choose from. What is WEKA? Collection of ML algorithms – open-source Java package. http://www.cs.waikato.ac.nz/ml/weka/" class="" onClick="javascript: window.open('/externalLinkRedirect.php?url=http%3A%2F%2Fwww.cs.waikato.ac.nz%2Fml%2Fweka%2F');return false">http://www.cs.waikato.ac.nz/ml/weka/. Schemes for classification include: decision trees.. 14. WekaUT: Extensions to WEKA. Clusterers package: SemiSupClusterer: Interface for semi-supervised clustering; SeededEM, SeededKMeans: Implements. Package weka.gui.beans. BeanCommon, Interface specifying routines that all weka beans should implement in order to allow the bean environment to exercise some control over the bean and also to allow. AbstractEvaluator, Abstract class for objects that can provide some kind of evaluation for classifier, clusterers etc. you step by step through the analysis of a simple problem using WEKA Explorer preprocessing, classification, clustering. A trial version of Weka package can be downloaded from the University of Waikato... WEKA contains “clusterers" for finding groups of similar instances in a dataset. The clustering schemes available. Description: A thin Python wrapper that uses the javabridge Python library to communicate with a Java Virtual Machine executing Weka API calls. Offers all major APIs, like data generators, loaders, savers, filters, classifiers, clusterers, attribute selection, associations and experiments. Weka packages can. weka/WekaClassification. This is the main algorithm that all of the Weka classification algorithms call. NaNB requests. WekaHierarchicalClusterer. weka/WekaHierarchicalClusterer. Uses Hierarchical clusterer, as implemented in Weka: http://weka.sourceforge.net/doc.stable/weka/clusterers/HierarchicalClusterer.html. Line. 1, package weka.clusterers.forMetisMQI.graph;. 2. 3, import java.util.HashSet;. 4, import java.util.Iterator;. 5, import java.util.Set;. 6. 7. 8. 9, public class Bisection {. 10. 11, private Subgraph a = null;. 12. 13, private Subgraph b = null;. 14. 15, private Set marked = null;. 16. 17, private UndirectedGraph g = null;. 18. Chapter 9 Modeling Data. In this chapter we're going to perform the fourth and last step of the OSEMN model that we can do on a computer: modeling data. Generally speaking, to model data is to create an abstract or higher-level description of your data. Just like with creating visualizations, it's like taking a step back from. To use this feature, you have to instruct Weka which data attribute to use for each row. From the command line, use the following: java -cp /path/to/weka.jar weka.clusterers.SimpleKMeans -t kmeansdata. arff -N 6 -S 42 -p 0 The –p 0 flag tells Weka to display the row and cluster based on the row number of the data. When this. This handy feature is available through meta schemes in WEKA, like FilteredClassifier (package weka.classifiers.meta), FilteredClusterer (package weka.clusterers), FilteredAssociator (package weka.associations) and FilteredAttributeEval/FilteredSubsetEval (in weka.attributeSelection). Instead of filtering the data. 25. 1.4.2 Running installed learning algorithms . . . . . . . . . . . 26. II The Graphical User Interface. 29. 2 Launching WEKA. 31. 3 Package Manager. 35. 3.1 Main window .. 3.4 Using an alternative central package meta data repository . . . . 37. 3.5 Package manager property file .. 5.4.1 Selecting a Clusterer . weka.clusterers. Class EM. java.lang.Object | +--weka.clusterers.Clusterer | +--weka.clusterers.DensityBasedClusterer | +--weka.clusterers.EM. All Implemented Interfaces: java.lang.Cloneable, OptionHandler, java.io.Serializable, WeightedInstancesHandler.
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