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Image inspection was performed manually immediately following each scan. The array image scan was processed with the Affymetrix GeneChip Command Console (AGCC) software. The GeneChip expression arrays contain control probe sets for both spiked and endogenous RNA transcripts (e.g., BioB, BioC, BioD, CreX
Affymetrix Expression Console™ Software (pdf, 468 KB). Frequently Asked Questions. Expression Console™ Software (pdf, 164 KB). Manuals. Expression Console™ Software (pdf, 6 MB) · Sample Attribute Editor (pdf, 597 KB). Quick Reference Cards. Expression Console Quick Reference Card (pdf, 1.13 MB). White Papers.
Expression Console Software supports probe set summarization and CHP file generation for 3' IVT expression arrays, whole-transcriptome arrays, and miRNA arrays.
Quick Start Guide for Exon Arrays. The purpose of the Expression Console™ software application is to enable probe set summarization and initial data quality examination for Affymetrix expression arrays. Expression Console software takes probe cell intensity files (.CEL) and creates probe level summarization files (.
7 Jan 2018 Image inspection was performed manually immediately following each scan. The array image scan was processed with the Affymetrix GeneChip Command Console (AGCC) software. The GeneChip expression arrays contain control probe sets for both spiked and endogenous RNA transcripts (e.g., BioB,
5 Oct 2006 iv Affymetrix® Expression Console™ Software v.1.0 – User Guide. CHAPTER 4. 3' Expression Array Analysis. 35. ANALYSIS CONTROLS. 35. ANALYSIS ALGORITHMS. 35. ANALYZE DATA. 36. RESULTS. 38. CHAPTER 5. Exon Array Analysis. 43. SPECIFY CONTROLS. 43. CHAPTER 6. QC Tables and
Instructions for performing RMA analyses in Expression console. 1. The RAW data should come as Affymetrix .CEL files. Save the files and remember their location. 2.Go to www.affymetrix.com If you don't have an account click “register" and create an account. Otherwise, log in. 3.Use the search tool to look up Affymetrix
Affymetrix® Transcriptome Analysis Console (TAC) Software. Easy-to-use software for differential expression analysis and visualization. A NEW analysis solution that transforms data to insight. The Affymetrix GeneChip® platform remains the gold standard for robust comprehensive expression analysis, and for the first time
CEL files are processed using modules from Affymetrix Power Tools (APT), distributed with AltAnalyze. Further instructions are provided within AltAnalyze. Option 2) Affymetrix Expression Console (Windows Only). An alternative to processing CEL files in AltAnalyze is the program Affymetrix Expression Console. Users using
Expression Console Software supports probe set summarization and CHP file generation for 3' IVT expression arrays, whole-transcriptome arrays, and miRNA arrays.

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February 2018