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The primary output is specified using the -out option, and defaults to standard output. Multiple output formats in one run. You can specify several -xxxout option on the same command line, which allows you to create multiple output formats in a single run, e.g.: muscle -in seqs.fa -fastaout seqs.afa -clwout seqs.aln
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Write output in CLUSTALW format with the "CLUSTAL W (1.81)" header rather than the MUSCLE version. This is useful when a post-processing step is picky about the file header. core. yes in muscle,. no in muscled. Do not catch exceptions. diags. no. Use diagonal optimizations. Faster, especially for closely related
To study directed migration of myeloid cells towards local infections, bacteria can be injected into the tail muscle, otic vesicle, or hindbrain ventricle 4-6. The use of manual manipulation techniques for pneumonia was first recorded as early as the Spanish influenza pandemic of 1918, when patients treated with standard
MUSCLE is a program for creating multiple alignments of amino acid or nucleotide sequences. A range of options is provided that give you the choice of optimizing accuracy, speed, or some compromise between the two. Default parameters are those that gave the best average benchmark accuracy in my tests. However
muscle mass.6 –9 In many studies, serum cystatin C has per- formed better than creatinine and is at least comparable DEXA scan (ages 30 to 67, n3072). The survey was completed by trained field interviewers at traced manually allowing calculation of ventricular volumes. Left ventricular ejection fraction (LVEF) was
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Full-text (PDF) | The analysis of EMG signals can be generally divided into three main issues, i.e., muscle force, muscle geometry and muscle fatigue. Recently, where N is the length of EMG signal for a trial (N = 3072). To yield an optimal performance of the TD-MDF and TD-. MNF methods to determine muscle force and
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